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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949931.1_cds_XP_016490621.1_81029
CDS Infomation

[gene=LOC107810364] [db_xref=GeneID:107810364] [protein=importin-9-like isoform X3] [protein_id=XP_016490621.1] [location=join(5006..5117,7555..7616,7776..7868,8787..8958,9177..9292,9469..9555,9635..9751,9840..9903,10038..10180,10513..10560,10649..10717,18204..18279,19996..20126,21128..21187,21331..21400,21552..21616,21711..21772,21855..21978,22065..22122,22264..22376,23112..23189,23272..23334,23459..23554,23668..23777,24619..24808,25312..25426,25624..25736,25813..25890,26194..26214)] [gbkey=CDS]
Sequence

ATGGATCAAGATCAACAATGGCTTATCAACTGTTTAAGTGCAACTCTTGACCCAAATCAA
CAAGTCCGTTCTTTTGCTGAAACTTCTCTTCAACAAGCCGCCCTTCAACCTGGTTTCGGA
AGCGCATTGTGTAGAATTGCGGCAATGAGAGAGCTATCGTTGGGATTACGTCAACTAGCT
GCTGTTATTCTAAAGCAGTTTATAAAGAAACACTGGCAGGAAGATGAGGAGGGTTTTGAG
CATCCTGTTGTTTCAAGCGATGAAAAGGTAGCTATACGTGGCCTGCTGTTGCCGTTGCTC
GATGATCCTCATAGAAAGATCTGCACGGCCATTGGTATGGCTGTGGCATCTATTGCCCAT
TGTGATTGGCCAGAAGACTGGCCTGACCTTTTACCGTCACTAATGAAGTGTATCTCTGAC
CAAACAAACATGAATGCTGTTCATGGAGCTTTGAGGTGCTTAGCTCTTGTATCGGCGGAT
TTGGATGATATGATGGTTCCAAAACTTGTTCCTGTTTTGTTTCCCTGCTTGCACACTATT
GTTTCATCACCTCAGATCTATGAGAAACCTCTGCGCATGAAGGCCCTTTCAATAGTTTAT
GCTTGTACCTCAATGCTGGGGGCTATGAGTGGTGTGTATAAGGCGGAGACGACTGGAATG
ATGGCACCTATGCTTCCATCTTGGATCAAACAATTCTCTTTAATTCTAGAACATCCAGTG
CAATCTGAAGACCCTGATGATTGGAGCATCAGGATGGAGGTTATAAAGTGCTTGAATCAG
TTCCTCCAGAACTTCCCAAGCCTCATGGAGAGTCAATTTAGGGTTTTTATGGGGCCATTG
TGGCAGACATTTGTATCATCTCTAGGAGTGTATACACGATCATCGATCGAAGGAATAGAA
GATCCTTATGATGGGAGATATGATTCTGATGGTGCAGAACAAAGTCTTGAATCATTCATC
ATCCAGTTATTTGAGTTTCTATTGACTATTTTGGGCAGCCCCAAATTTGTAAAGGTAGTC
GGGAGCAATGTAAAGGAGTTGGTTTACTATACTATTGCCTTTATGCAGACAACAGATCAA
CAGGTTCACACCTGGTCTATTGATGCCAATCAATATGTTGCTGATGAGGATGATAATACT
TACAGCTGTCGTGCTTCTGGTGCCCTTTTGCTGGAAGAAGTCATTAGTTCTTGTGGTACG
CATGGAATTCATGCTATCATTGACTCAGCGAAGACGCGATTTAGCGAGTCTCAGCAAGAA
AAAGCATCTGGTGCTTCGAGCTGGTGGAAAATGAGGGAGGCCACACTCTTTGCTTTGGCT
TCGGTGTCTGAACAATTACTTGAAGCTGAGGTCCCTGAAATGACTAAAGTCAGTTTAGGA
AATACTTTAGAACAAATTCTTTCAGAAGACATGGCAACAGGGGTAAATGAATATCCCTTC
TTATATGCCCGTATGTTCTCTTCTATTGCTAAGTTCTCCTCCATGGTCAGCCAGGGTCTA
ATTGAACACTTCCTATATACAGCTATCAAGGCACTTAGCGTGGATATGCCTCCACCTGTA
AAAGTAGGGGCATGTAGAGCACTTTCTCAACTTTTACCTGATACAAATAAAGAGATTCTC
CGTCCTCATTTCTTGGATTTATTTTCATCACTCACAGATCTTCTTAAGCATGCTTCTGAT
GAAACCATGCATCTAGTGCTTGAAACACTGCAGGAGACTGTAAAAGCAGGCCCTGAGTTC
GCAGTATCTACTGAGCCAGTTCTCTCTCCTATTATCCTCAATATGTGGGCTTCGAATGTT
GCGGACCCTTTCGTCAGCATTGATGCTCTTGAGGTTCTGGAGGCAATAAAAAATGCTCCC
GGTTGTATGCACCCACTGGTTTCTCGAGTTTTACCTTATATTGGGCCCATTCTAAATAAA
CCACATCAGCAGCCAGAGGGTTTAGTTGCTGGTTCACTAGATCTCGTGACGATGTTGTTG
AAGAATGCCCCAACTCACATTGTAAAGGCGGTGTATGAAGTCTCTTTTGATCCTGTTGTT
CGTATAGTCCTTCAAAGTGATGATCATAGTGAAATGCAGAATGCAACACAGTGCTTAGCT
GCTCTTATATCTGGAGGGAAAGAAGAATTGCTTGCTTGGGGAGGTGATACAGCATTCGCG
ATGAGAAGTTTGCTTGATGTGGCTTCAAGGCTTCTGGATCCTGATCTAGAAAGTTCCGGA
GCACTTTTTGTTGGGAGCTATATCCTTCAACTTATTCTGCATCTCCCTTCACAAATGGCT
CAACATATCAGAGACCTGGTTGCTGCACTTGTGAGGCGCATGCAATCTTGTAAAATTTCT
GGGTTAAGAAGCTCTTTGTTGGTTATTTTTGCCAGATTGGTCCACATGAGTGCTCCTCAC
GTTGAGCAATTTATTGAGTTGCTGATCTCAATTCCAGCGGAAGGTCATCCTAACTCCTTC
GCTTACATCATGTTTGAGTGGACAAAGCAGCAAGGGGAAATTCAGGGGGCTTACCAAATT
AAAGTTACCACAACCGCTTTGGCTTTACTGTTATCTACAAAGCATGTTGAGTTGGGGAAA
CTGAATGTTCAAGGCCATCTAATTCAGTCTACTGCAGGGATAACGACACGCTCAAAAGCT
AAGACAGCTCCAGATCAATGGACGTTGGTGCCTCTTCCTGGAAAGAACTTATGTTTATGG
ACTTAA

Peptide Sequence

PEP ID

XP_016490621.1
PEP Infomation

PREDICTED: importin-9-like isoform X3 [Nicotiana tabacum]
Sequence

MDQDQQWLINCLSATLDPNQQVRSFAETSLQQAALQPGFGSALCRIAAMRELSLGLRQLA
AVILKQFIKKHWQEDEEGFEHPVVSSDEKVAIRGLLLPLLDDPHRKICTAIGMAVASIAH
CDWPEDWPDLLPSLMKCISDQTNMNAVHGALRCLALVSADLDDMMVPKLVPVLFPCLHTI
VSSPQIYEKPLRMKALSIVYACTSMLGAMSGVYKAETTGMMAPMLPSWIKQFSLILEHPV
QSEDPDDWSIRMEVIKCLNQFLQNFPSLMESQFRVFMGPLWQTFVSSLGVYTRSSIEGIE
DPYDGRYDSDGAEQSLESFIIQLFEFLLTILGSPKFVKVVGSNVKELVYYTIAFMQTTDQ
QVHTWSIDANQYVADEDDNTYSCRASGALLLEEVISSCGTHGIHAIIDSAKTRFSESQQE
KASGASSWWKMREATLFALASVSEQLLEAEVPEMTKVSLGNTLEQILSEDMATGVNEYPF
LYARMFSSIAKFSSMVSQGLIEHFLYTAIKALSVDMPPPVKVGACRALSQLLPDTNKEIL
RPHFLDLFSSLTDLLKHASDETMHLVLETLQETVKAGPEFAVSTEPVLSPIILNMWASNV
ADPFVSIDALEVLEAIKNAPGCMHPLVSRVLPYIGPILNKPHQQPEGLVAGSLDLVTMLL
KNAPTHIVKAVYEVSFDPVVRIVLQSDDHSEMQNATQCLAALISGGKEELLAWGGDTAFA
MRSLLDVASRLLDPDLESSGALFVGSYILQLILHLPSQMAQHIRDLVAALVRRMQSCKIS
GLRSSLLVIFARLVHMSAPHVEQFIELLISIPAEGHPNSFAYIMFEWTKQQGEIQGAYQI
KVTTTALALLLSTKHVELGKLNVQGHLIQSTAGITTRSKAKTAPDQWTLVPLPGKNLCLW
T

Transcript Sequence

Gene sequence data has not been registered.